Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 MIR7706-201ENST00000613747 67 ntBASIC17.69■□□□□ 0.42
RTL3Q8N8U3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 AC006504.4-201ENST00000592118 1568 ntBASIC17.69■□□□□ 0.42
RTL3Q8N8U3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL3Q8N8U3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AC073621.1-201ENST00000392730 636 ntBASIC17.68■□□□□ 0.42
RTL3Q8N8U3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AC105339.3-201ENST00000560043 636 ntBASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AC012640.2-201ENST00000561606 901 ntBASIC17.68■□□□□ 0.42
RTL3Q8N8U3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AP001005.1-201ENST00000571755 1248 ntBASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 OR6D1P-202ENST00000641007 5290 ntBASIC17.68■□□□□ 0.42
RTL3Q8N8U3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL3Q8N8U3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 FDX1P1-201ENST00000449115 551 ntBASIC17.67■□□□□ 0.42
RTL3Q8N8U3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 AL049840.3-201ENST00000602669 611 ntBASIC17.67■□□□□ 0.42
RTL3Q8N8U3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 HLA-A-201ENST00000376802 1334 ntBASIC17.67■□□□□ 0.42
RTL3Q8N8U3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms