Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 POM121L3P-201ENST00000419331 1163 ntBASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 MIR3180-1-201ENST00000580374 94 ntBASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 MIR3180-3-201ENST00000584616 94 ntBASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 NPAP1P7-201ENST00000613027 823 ntBASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 AC060834.1-201ENST00000443027 2032 ntBASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 OR6D1P-202ENST00000641007 5290 ntBASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 AL135999.2-201ENST00000622438 1686 ntBASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 LINC00265-3P-201ENST00000447588 903 ntBASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 AC092329.2-201ENST00000598402 547 ntBASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 AC069148.1-201ENST00000608741 768 ntBASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 AC091076.1-201ENST00000610741 619 ntBASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
LSMEM1Q8N8F7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 PMPCAP1-201ENST00000508114 1576 ntBASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 PCDHA1-201ENST00000378133 2726 ntBASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.83■□□□□ 0.13
LSMEM1Q8N8F7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 RCN1P2-201ENST00000398357 915 ntBASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 ATP5G2P1-201ENST00000433580 426 ntBASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 AC124947.2-201ENST00000547118 1133 ntBASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 AC012615.1-201ENST00000565797 1299 ntBASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.83■□□□□ 0.12
LSMEM1Q8N8F7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms