Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 RBM17P3-201ENST00000417687 1192 ntBASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 AL121772.3-201ENST00000610840 674 ntBASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF440Q8IYI8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 AP005117.1-201ENST00000584346 1413 ntBASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 HCG4P8-203ENST00000443049 980 ntBASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF440Q8IYI8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 PRYP5-201ENST00000451909 266 ntBASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 AC132008.2-207ENST00000454517 770 ntBASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 FOSL1P1-201ENST00000511041 816 ntBASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 AC106795.1-205ENST00000512851 1056 ntBASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF440Q8IYI8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF440Q8IYI8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF440Q8IYI8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
ZNF440Q8IYI8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms