Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 AC104109.2-201ENST00000602919 1418 ntBASIC16.54■□□□□ 0.24
RAB43Q86YS6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 KRT8P47-201ENST00000604727 1398 ntBASIC16.54■□□□□ 0.24
RAB43Q86YS6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 IGHV3-22-201ENST00000520721 359 ntBASIC16.54■□□□□ 0.24
RAB43Q86YS6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 AC027601.4-201ENST00000611259 610 ntBASIC16.54■□□□□ 0.24
RAB43Q86YS6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
RAB43Q86YS6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB43Q86YS6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 AD000864.1-201ENST00000624076 2295 ntBASIC16.53■□□□□ 0.24
RAB43Q86YS6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 PMPCAP1-201ENST00000508114 1576 ntBASIC16.53■□□□□ 0.24
RAB43Q86YS6 AC010460.3-201ENST00000511359 1579 ntBASIC16.53■□□□□ 0.24
RAB43Q86YS6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 AL591424.1-201ENST00000442569 1213 ntBASIC16.53■□□□□ 0.24
RAB43Q86YS6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 BX005266.1-201ENST00000473402 457 ntBASIC16.53■□□□□ 0.24
RAB43Q86YS6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 AC116407.2-201ENST00000613639 860 ntBASIC16.53■□□□□ 0.24
RAB43Q86YS6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 MIR1199-201ENST00000621445 119 ntBASIC16.53■□□□□ 0.24
RAB43Q86YS6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAB43Q86YS6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB43Q86YS6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms