Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 MIR662-201ENST00000384847 95 ntBASIC15.41■□□□□ 0.06
LRRC28Q86X40 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 UPK3BP1-201ENST00000428678 509 ntBASIC15.41■□□□□ 0.06
LRRC28Q86X40 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 AL645929.1-201ENST00000420084 975 ntBASIC15.4■□□□□ 0.06
LRRC28Q86X40 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.4■□□□□ 0.06
LRRC28Q86X40 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
LRRC28Q86X40 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC28Q86X40 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
LRRC28Q86X40 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.39■□□□□ 0.06
LRRC28Q86X40 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.39■□□□□ 0.05
LRRC28Q86X40 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC28Q86X40 AC006449.5-201ENST00000610658 2098 ntBASIC15.39■□□□□ 0.05
LRRC28Q86X40 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms