Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 AL050303.2-201ENST00000619798 666 ntBASIC13.09□□□□□ -0.31
MRPL54Q6P161 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
MRPL54Q6P161 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.08□□□□□ -0.31
MRPL54Q6P161 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MRPL54Q6P161 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
MRPL54Q6P161 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 AC097658.1-201ENST00000475555 843 ntBASIC13.08□□□□□ -0.32
MRPL54Q6P161 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 MIR3180-5-201ENST00000583743 153 ntBASIC13.08□□□□□ -0.32
MRPL54Q6P161 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 AC011298.2-201ENST00000617989 482 ntBASIC13.08□□□□□ -0.32
MRPL54Q6P161 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.08□□□□□ -0.32
MRPL54Q6P161 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL54Q6P161 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 LINC02228-204ENST00000642115 2962 ntBASIC13.07□□□□□ -0.32
MRPL54Q6P161 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 AC009065.1-201ENST00000564055 1225 ntBASIC13.07□□□□□ -0.32
MRPL54Q6P161 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms