Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC134684.3-201ENST00000641758 218 ntBASIC20.78■□□□□ 0.92
RFX7Q2KHR2 AC092865.6-201ENST00000642101 219 ntBASIC20.78■□□□□ 0.92
RFX7Q2KHR2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 FRMD8P1-201ENST00000440433 1524 ntBASIC20.78■□□□□ 0.92
RFX7Q2KHR2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 AC018845.2-201ENST00000568326 409 ntBASIC20.77■□□□□ 0.92
RFX7Q2KHR2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 AC010507.1-201ENST00000633895 436 ntBASIC20.77■□□□□ 0.92
RFX7Q2KHR2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RFX7Q2KHR2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 AL513190.1-201ENST00000621254 727 ntBASIC20.76■□□□□ 0.91
RFX7Q2KHR2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.76■□□□□ 0.91
RFX7Q2KHR2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.76■□□□□ 0.91
RFX7Q2KHR2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 AC004790.2-201ENST00000623588 572 ntBASIC20.75■□□□□ 0.91
RFX7Q2KHR2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms