Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DDR1Q08345 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDR1Q08345 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDR1Q08345 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.25■□□□□ 0.99
DDR1Q08345 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.25■□□□□ 0.99
DDR1Q08345 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDR1Q08345 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.24■□□□□ 0.99
DDR1Q08345 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
DDR1Q08345 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
DDR1Q08345 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.24■□□□□ 0.99
DDR1Q08345 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.24■□□□□ 0.99
DDR1Q08345 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.24■□□□□ 0.99
DDR1Q08345 SPTLC1P1-201ENST00000447199 261 ntBASIC21.24■□□□□ 0.99
DDR1Q08345 AC027369.6-201ENST00000525520 931 ntBASIC21.24■□□□□ 0.99
DDR1Q08345 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.24■□□□□ 0.99
DDR1Q08345 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.24■□□□□ 0.99
DDR1Q08345 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.24■□□□□ 0.99
DDR1Q08345 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.24■□□□□ 0.99
DDR1Q08345 AC009118.2-201ENST00000613275 655 ntBASIC21.24■□□□□ 0.99
DDR1Q08345 SPDYE12P-201ENST00000618416 771 ntBASIC21.24■□□□□ 0.99
DDR1Q08345 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDR1Q08345 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
DDR1Q08345 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDR1Q08345 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.23■□□□□ 0.99
DDR1Q08345 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDR1Q08345 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.23■□□□□ 0.99
DDR1Q08345 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDR1Q08345 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DDR1Q08345 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 AL031055.1-201ENST00000606362 631 ntBASIC21.23■□□□□ 0.99
DDR1Q08345 SLC22A20-204ENST00000530038 1673 ntBASIC21.23■□□□□ 0.99
DDR1Q08345 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.23■□□□□ 0.99
DDR1Q08345 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDR1Q08345 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.23■□□□□ 0.99
DDR1Q08345 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDR1Q08345 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
DDR1Q08345 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
DDR1Q08345 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 AL353732.1-201ENST00000569618 1459 ntBASIC21.22■□□□□ 0.99
DDR1Q08345 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
DDR1Q08345 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.22■□□□□ 0.99
DDR1Q08345 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
DDR1Q08345 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.22■□□□□ 0.99
DDR1Q08345 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.22■□□□□ 0.99
DDR1Q08345 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.22■□□□□ 0.99
DDR1Q08345 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DDR1Q08345 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
DDR1Q08345 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
DDR1Q08345 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.22■□□□□ 0.99
DDR1Q08345 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DDR1Q08345 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
DDR1Q08345 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
DDR1Q08345 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDR1Q08345 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.22■□□□□ 0.99
DDR1Q08345 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 AC016027.1-202ENST00000607927 1699 ntBASIC21.21■□□□□ 0.99
DDR1Q08345 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.21■□□□□ 0.99
DDR1Q08345 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.21■□□□□ 0.99
DDR1Q08345 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DDR1Q08345 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.21■□□□□ 0.99
DDR1Q08345 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.21■□□□□ 0.99
DDR1Q08345 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.21■□□□□ 0.99
DDR1Q08345 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.21■□□□□ 0.99
DDR1Q08345 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.21■□□□□ 0.99
DDR1Q08345 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.21■□□□□ 0.99
DDR1Q08345 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.21■□□□□ 0.99
DDR1Q08345 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.21■□□□□ 0.99
DDR1Q08345 AC022144.1-201ENST00000602255 1580 ntBASIC21.21■□□□□ 0.99
DDR1Q08345 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms