Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP46P62068 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.16■□□□□ 0.5
USP46P62068 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.16■□□□□ 0.5
USP46P62068 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.16■□□□□ 0.5
USP46P62068 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.16■□□□□ 0.5
USP46P62068 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.16■□□□□ 0.5
USP46P62068 AC064836.3-201ENST00000607928 673 ntBASIC18.16■□□□□ 0.5
USP46P62068 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.16■□□□□ 0.5
USP46P62068 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.16■□□□□ 0.5
USP46P62068 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.16■□□□□ 0.5
USP46P62068 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.15■□□□□ 0.5
USP46P62068 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
USP46P62068 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP46P62068 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
USP46P62068 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
USP46P62068 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.15■□□□□ 0.5
USP46P62068 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.15■□□□□ 0.5
USP46P62068 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.15■□□□□ 0.5
USP46P62068 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.15■□□□□ 0.5
USP46P62068 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.15■□□□□ 0.5
USP46P62068 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
USP46P62068 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.15■□□□□ 0.5
USP46P62068 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.15■□□□□ 0.5
USP46P62068 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.15■□□□□ 0.5
USP46P62068 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
USP46P62068 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP46P62068 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP46P62068 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
USP46P62068 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
USP46P62068 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.14■□□□□ 0.5
USP46P62068 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.14■□□□□ 0.49
USP46P62068 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
USP46P62068 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.14■□□□□ 0.49
USP46P62068 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP46P62068 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
USP46P62068 STK33P1-201ENST00000423835 1218 ntBASIC18.14■□□□□ 0.49
USP46P62068 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.14■□□□□ 0.49
USP46P62068 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 AC092865.5-201ENST00000545435 363 ntBASIC18.14■□□□□ 0.49
USP46P62068 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.14■□□□□ 0.49
USP46P62068 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.14■□□□□ 0.49
USP46P62068 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.14■□□□□ 0.49
USP46P62068 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.14■□□□□ 0.49
USP46P62068 AC006538.3-201ENST00000612495 578 ntBASIC18.14■□□□□ 0.49
USP46P62068 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
USP46P62068 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
USP46P62068 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.14■□□□□ 0.49
USP46P62068 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.14■□□□□ 0.49
USP46P62068 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP46P62068 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.13■□□□□ 0.49
USP46P62068 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
USP46P62068 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP46P62068 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP46P62068 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP46P62068 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP46P62068 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.13■□□□□ 0.49
USP46P62068 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
USP46P62068 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
USP46P62068 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
USP46P62068 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP46P62068 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP46P62068 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms