Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MCCD1P59942 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.42■□□□□ 0.54
MCCD1P59942 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.42■□□□□ 0.54
MCCD1P59942 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MCCD1P59942 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MCCD1P59942 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MCCD1P59942 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MCCD1P59942 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.42■□□□□ 0.54
MCCD1P59942 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.42■□□□□ 0.54
MCCD1P59942 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MCCD1P59942 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.42■□□□□ 0.54
MCCD1P59942 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MCCD1P59942 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.41■□□□□ 0.54
MCCD1P59942 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MCCD1P59942 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.41■□□□□ 0.54
MCCD1P59942 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.41■□□□□ 0.54
MCCD1P59942 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MCCD1P59942 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MCCD1P59942 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 AL031284.1-201ENST00000419297 478 ntBASIC18.41■□□□□ 0.54
MCCD1P59942 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.41■□□□□ 0.54
MCCD1P59942 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
MCCD1P59942 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.41■□□□□ 0.54
MCCD1P59942 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 MIR7706-201ENST00000613747 67 ntBASIC18.41■□□□□ 0.54
MCCD1P59942 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.41■□□□□ 0.54
MCCD1P59942 AL773604.1-201ENST00000617417 272 ntBASIC18.41■□□□□ 0.54
MCCD1P59942 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.41■□□□□ 0.54
MCCD1P59942 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.41■□□□□ 0.54
MCCD1P59942 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.41■□□□□ 0.54
MCCD1P59942 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MCCD1P59942 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MCCD1P59942 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 AP002414.3-201ENST00000589352 1468 ntBASIC18.4■□□□□ 0.54
MCCD1P59942 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MCCD1P59942 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MCCD1P59942 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MCCD1P59942 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MCCD1P59942 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.4■□□□□ 0.54
MCCD1P59942 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.4■□□□□ 0.54
MCCD1P59942 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 HLA-A-201ENST00000376802 1334 ntBASIC18.4■□□□□ 0.54
MCCD1P59942 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.4■□□□□ 0.54
MCCD1P59942 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.4■□□□□ 0.54
MCCD1P59942 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MCCD1P59942 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MCCD1P59942 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.4■□□□□ 0.54
MCCD1P59942 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.39■□□□□ 0.54
MCCD1P59942 NKILA-202ENST00000614771 2598 ntBASIC18.39■□□□□ 0.54
MCCD1P59942 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
MCCD1P59942 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MCCD1P59942 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.39■□□□□ 0.54
MCCD1P59942 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.39■□□□□ 0.54
MCCD1P59942 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.39■□□□□ 0.53
MCCD1P59942 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 AC006277.1-201ENST00000624348 1610 ntBASIC18.39■□□□□ 0.53
MCCD1P59942 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.39■□□□□ 0.53
MCCD1P59942 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.39■□□□□ 0.53
MCCD1P59942 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.39■□□□□ 0.53
MCCD1P59942 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MCCD1P59942 TPM4P1-201ENST00000436100 807 ntBASIC18.39■□□□□ 0.53
MCCD1P59942 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.39■□□□□ 0.53
MCCD1P59942 IGHV3-22-201ENST00000520721 359 ntBASIC18.39■□□□□ 0.53
MCCD1P59942 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
MCCD1P59942 AL662844.1-201ENST00000546340 181 ntBASIC18.39■□□□□ 0.53
MCCD1P59942 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.39■□□□□ 0.53
MCCD1P59942 AL049840.3-201ENST00000602669 611 ntBASIC18.39■□□□□ 0.53
MCCD1P59942 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MCCD1P59942 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms