Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S2P59780 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.88□□□□□ -0.03
AP3S2P59780 MIR4674-201ENST00000582457 87 ntBASIC14.88□□□□□ -0.03
AP3S2P59780 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S2P59780 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP3S2P59780 AC133041.1-202ENST00000642053 222 ntBASIC14.88□□□□□ -0.03
AP3S2P59780 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S2P59780 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
AP3S2P59780 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S2P59780 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 AL662844.4-201ENST00000606367 2838 ntBASIC14.88□□□□□ -0.03
AP3S2P59780 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP3S2P59780 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S2P59780 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S2P59780 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 AC133681.1-201ENST00000465482 601 ntBASIC14.87□□□□□ -0.03
AP3S2P59780 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.87□□□□□ -0.03
AP3S2P59780 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.87□□□□□ -0.03
AP3S2P59780 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S2P59780 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S2P59780 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
AP3S2P59780 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.87□□□□□ -0.03
AP3S2P59780 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S2P59780 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.86□□□□□ -0.03
AP3S2P59780 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.86□□□□□ -0.03
AP3S2P59780 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.86□□□□□ -0.03
AP3S2P59780 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 WWOX-216ENST00000569818 525 ntBASIC14.86□□□□□ -0.03
AP3S2P59780 AC008403.3-201ENST00000598924 454 ntBASIC14.86□□□□□ -0.03
AP3S2P59780 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
AP3S2P59780 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S2P59780 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
AP3S2P59780 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S2P59780 AL365203.3-201ENST00000609742 2057 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms