Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.46■□□□□ 0.39
WNT3AP56704 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.46■□□□□ 0.39
WNT3AP56704 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.46■□□□□ 0.39
WNT3AP56704 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.46■□□□□ 0.39
WNT3AP56704 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.46■□□□□ 0.39
WNT3AP56704 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.46■□□□□ 0.39
WNT3AP56704 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
WNT3AP56704 AL022326.1-202ENST00000641533 845 ntBASIC17.46■□□□□ 0.39
WNT3AP56704 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.46■□□□□ 0.39
WNT3AP56704 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
WNT3AP56704 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.46■□□□□ 0.39
WNT3AP56704 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
WNT3AP56704 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.46■□□□□ 0.39
WNT3AP56704 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
WNT3AP56704 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
WNT3AP56704 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
WNT3AP56704 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
WNT3AP56704 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.45■□□□□ 0.38
WNT3AP56704 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 LINC00982-205ENST00000420957 435 ntBASIC17.45■□□□□ 0.38
WNT3AP56704 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.45■□□□□ 0.38
WNT3AP56704 AF238378.1-201ENST00000526806 358 ntBASIC17.45■□□□□ 0.38
WNT3AP56704 SART3-203ENST00000546611 1184 ntBASIC17.45■□□□□ 0.38
WNT3AP56704 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.45■□□□□ 0.38
WNT3AP56704 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
WNT3AP56704 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
WNT3AP56704 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
WNT3AP56704 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.44■□□□□ 0.38
WNT3AP56704 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
WNT3AP56704 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
WNT3AP56704 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
WNT3AP56704 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.44■□□□□ 0.38
WNT3AP56704 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
WNT3AP56704 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
WNT3AP56704 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
WNT3AP56704 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
WNT3AP56704 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.44■□□□□ 0.38
WNT3AP56704 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.44■□□□□ 0.38
WNT3AP56704 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
WNT3AP56704 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
WNT3AP56704 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.43■□□□□ 0.38
WNT3AP56704 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.43■□□□□ 0.38
WNT3AP56704 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
WNT3AP56704 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.43■□□□□ 0.38
WNT3AP56704 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.43■□□□□ 0.38
WNT3AP56704 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 PCDHA12-202ENST00000613593 2588 ntBASIC17.43■□□□□ 0.38
WNT3AP56704 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WNT3AP56704 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.43■□□□□ 0.38
WNT3AP56704 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
WNT3AP56704 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms