Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 Z92544.3-201ENST00000624747 417 ntBASIC20.34■□□□□ 0.85
CACNB3P54284 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.34■□□□□ 0.85
CACNB3P54284 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.34■□□□□ 0.85
CACNB3P54284 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CACNB3P54284 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNB3P54284 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNB3P54284 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNB3P54284 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNB3P54284 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CACNB3P54284 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CACNB3P54284 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CACNB3P54284 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CACNB3P54284 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CACNB3P54284 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.33■□□□□ 0.85
CACNB3P54284 AL592309.1-201ENST00000443127 649 ntBASIC20.33■□□□□ 0.85
CACNB3P54284 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.33■□□□□ 0.85
CACNB3P54284 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.33■□□□□ 0.85
CACNB3P54284 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
CACNB3P54284 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.33■□□□□ 0.85
CACNB3P54284 DUX4L17-201ENST00000557360 1267 ntBASIC20.33■□□□□ 0.85
CACNB3P54284 AL096865.1-201ENST00000606796 927 ntBASIC20.33■□□□□ 0.85
CACNB3P54284 AL645728.2-201ENST00000641974 660 ntBASIC20.33■□□□□ 0.85
CACNB3P54284 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CACNB3P54284 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CACNB3P54284 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.33■□□□□ 0.84
CACNB3P54284 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNB3P54284 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNB3P54284 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNB3P54284 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.33■□□□□ 0.84
CACNB3P54284 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.33■□□□□ 0.84
CACNB3P54284 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CACNB3P54284 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CACNB3P54284 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNB3P54284 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CACNB3P54284 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.33■□□□□ 0.84
CACNB3P54284 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNB3P54284 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CACNB3P54284 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.33■□□□□ 0.84
CACNB3P54284 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.33■□□□□ 0.84
CACNB3P54284 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CACNB3P54284 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.32■□□□□ 0.84
CACNB3P54284 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 HMGA1P7-201ENST00000406908 502 ntBASIC20.32■□□□□ 0.84
CACNB3P54284 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 AC243562.1-201ENST00000560672 389 ntBASIC20.32■□□□□ 0.84
CACNB3P54284 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.32■□□□□ 0.84
CACNB3P54284 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.32■□□□□ 0.84
CACNB3P54284 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.32■□□□□ 0.84
CACNB3P54284 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.32■□□□□ 0.84
CACNB3P54284 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CACNB3P54284 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNB3P54284 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CACNB3P54284 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CACNB3P54284 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.31■□□□□ 0.84
CACNB3P54284 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 TFAMP1-201ENST00000412727 736 ntBASIC20.31■□□□□ 0.84
CACNB3P54284 FAM86GP-201ENST00000448322 971 ntBASIC20.31■□□□□ 0.84
CACNB3P54284 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.31■□□□□ 0.84
CACNB3P54284 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.31■□□□□ 0.84
CACNB3P54284 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNB3P54284 AL135744.1-201ENST00000565098 629 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms