Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 AC113347.1-201ENST00000413321 391 ntBASIC17.75■□□□□ 0.43
ITGA8P53708 AL137013.1-201ENST00000432946 1228 ntBASIC17.75■□□□□ 0.43
ITGA8P53708 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.75■□□□□ 0.43
ITGA8P53708 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 HYMAI.1-201ENST00000620949 238 ntBASIC17.75■□□□□ 0.43
ITGA8P53708 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
ITGA8P53708 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ITGA8P53708 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITGA8P53708 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ITGA8P53708 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 AC046158.3-201ENST00000624947 2558 ntBASIC17.75■□□□□ 0.43
ITGA8P53708 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ITGA8P53708 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.75■□□□□ 0.43
ITGA8P53708 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ITGA8P53708 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 AC008894.3-201ENST00000624324 3103 ntBASIC17.74■□□□□ 0.43
ITGA8P53708 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
ITGA8P53708 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ITGA8P53708 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.74■□□□□ 0.43
ITGA8P53708 AC005363.2-201ENST00000618631 242 ntBASIC17.74■□□□□ 0.43
ITGA8P53708 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.74■□□□□ 0.43
ITGA8P53708 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.74■□□□□ 0.43
ITGA8P53708 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ITGA8P53708 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 AL049757.1-201ENST00000616842 1596 ntBASIC17.74■□□□□ 0.43
ITGA8P53708 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.74■□□□□ 0.43
ITGA8P53708 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
ITGA8P53708 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ITGA8P53708 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ITGA8P53708 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ITGA8P53708 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.73■□□□□ 0.43
ITGA8P53708 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
ITGA8P53708 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ITGA8P53708 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ITGA8P53708 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ITGA8P53708 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ITGA8P53708 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ITGA8P53708 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ITGA8P53708 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.73■□□□□ 0.43
ITGA8P53708 AC006449.5-201ENST00000610658 2098 ntBASIC17.73■□□□□ 0.43
ITGA8P53708 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ITGA8P53708 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.73■□□□□ 0.43
ITGA8P53708 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
ITGA8P53708 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.72■□□□□ 0.43
ITGA8P53708 AC073508.3-201ENST00000619697 1419 ntBASIC17.72■□□□□ 0.43
ITGA8P53708 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ITGA8P53708 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ITGA8P53708 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.72■□□□□ 0.43
ITGA8P53708 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
ITGA8P53708 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITGA8P53708 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.72■□□□□ 0.43
ITGA8P53708 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms