Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COPAP53621 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.85■□□□□ 0.45
COPAP53621 AP002414.3-201ENST00000589352 1468 ntBASIC17.85■□□□□ 0.45
COPAP53621 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.85■□□□□ 0.45
COPAP53621 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPAP53621 AC141586.5-201ENST00000624546 2050 ntBASIC17.85■□□□□ 0.45
COPAP53621 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
COPAP53621 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.85■□□□□ 0.45
COPAP53621 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPAP53621 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.85■□□□□ 0.45
COPAP53621 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.85■□□□□ 0.45
COPAP53621 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.84■□□□□ 0.45
COPAP53621 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.84■□□□□ 0.45
COPAP53621 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 COX5BP2-201ENST00000392354 334 ntBASIC17.84■□□□□ 0.45
COPAP53621 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.84■□□□□ 0.45
COPAP53621 LAGE3P1-201ENST00000425356 484 ntBASIC17.84■□□□□ 0.45
COPAP53621 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.84■□□□□ 0.45
COPAP53621 RNA5SP415-201ENST00000517246 115 ntBASIC17.84■□□□□ 0.45
COPAP53621 PGAM5P1-201ENST00000518923 814 ntBASIC17.84■□□□□ 0.45
COPAP53621 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.84■□□□□ 0.45
COPAP53621 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.84■□□□□ 0.45
COPAP53621 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.84■□□□□ 0.45
COPAP53621 AL022326.1-202ENST00000641533 845 ntBASIC17.84■□□□□ 0.45
COPAP53621 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.84■□□□□ 0.45
COPAP53621 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.84■□□□□ 0.45
COPAP53621 AC004817.3-201ENST00000602957 2129 ntBASIC17.84■□□□□ 0.45
COPAP53621 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COPAP53621 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPAP53621 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPAP53621 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COPAP53621 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COPAP53621 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
COPAP53621 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
COPAP53621 SIGLEC16-201ENST00000599858 1437 ntBASIC17.83■□□□□ 0.45
COPAP53621 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
COPAP53621 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COPAP53621 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPAP53621 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.83■□□□□ 0.44
COPAP53621 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 AC103564.2-201ENST00000432853 1299 ntBASIC17.83■□□□□ 0.44
COPAP53621 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.83■□□□□ 0.44
COPAP53621 AC092865.5-201ENST00000545435 363 ntBASIC17.83■□□□□ 0.44
COPAP53621 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.83■□□□□ 0.44
COPAP53621 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
COPAP53621 Z83851.2-201ENST00000609564 659 ntBASIC17.83■□□□□ 0.44
COPAP53621 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.83■□□□□ 0.44
COPAP53621 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.83■□□□□ 0.44
COPAP53621 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.83■□□□□ 0.44
COPAP53621 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COPAP53621 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
COPAP53621 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.83■□□□□ 0.44
COPAP53621 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.83■□□□□ 0.44
COPAP53621 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.83■□□□□ 0.44
COPAP53621 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.83■□□□□ 0.44
COPAP53621 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPAP53621 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.82■□□□□ 0.44
COPAP53621 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COPAP53621 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPAP53621 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPAP53621 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPAP53621 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COPAP53621 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPAP53621 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPAP53621 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPAP53621 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPAP53621 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms