Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.25■□□□□ 0.67
LBX1P52954 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.25■□□□□ 0.67
LBX1P52954 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.25■□□□□ 0.67
LBX1P52954 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.24■□□□□ 0.67
LBX1P52954 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.24■□□□□ 0.67
LBX1P52954 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 AC009949.1-201ENST00000623048 1830 ntBASIC19.24■□□□□ 0.67
LBX1P52954 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.24■□□□□ 0.67
LBX1P52954 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.24■□□□□ 0.67
LBX1P52954 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 MEP1AP4-201ENST00000423244 1087 ntBASIC19.24■□□□□ 0.67
LBX1P52954 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 USP32P1-208ENST00000506594 1164 ntBASIC19.24■□□□□ 0.67
LBX1P52954 AL079307.3-201ENST00000556114 283 ntBASIC19.24■□□□□ 0.67
LBX1P52954 AC023310.3-201ENST00000557027 670 ntBASIC19.24■□□□□ 0.67
LBX1P52954 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 AC100756.1-201ENST00000562736 682 ntBASIC19.24■□□□□ 0.67
LBX1P52954 AC138749.3-201ENST00000567691 622 ntBASIC19.24■□□□□ 0.67
LBX1P52954 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.24■□□□□ 0.67
LBX1P52954 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.24■□□□□ 0.67
LBX1P52954 SRD5A3P1-201ENST00000603021 949 ntBASIC19.24■□□□□ 0.67
LBX1P52954 AC116165.1-201ENST00000611806 668 ntBASIC19.24■□□□□ 0.67
LBX1P52954 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.24■□□□□ 0.67
LBX1P52954 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LBX1P52954 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
LBX1P52954 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.23■□□□□ 0.67
LBX1P52954 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LBX1P52954 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.23■□□□□ 0.67
LBX1P52954 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LBX1P52954 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
LBX1P52954 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LBX1P52954 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.23■□□□□ 0.67
LBX1P52954 HLA-H-201ENST00000383620 1096 ntBASIC19.23■□□□□ 0.67
LBX1P52954 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LBX1P52954 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LBX1P52954 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.23■□□□□ 0.67
LBX1P52954 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.23■□□□□ 0.67
LBX1P52954 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.23■□□□□ 0.67
LBX1P52954 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.23■□□□□ 0.67
LBX1P52954 AC010319.3-201ENST00000597028 470 ntBASIC19.23■□□□□ 0.67
LBX1P52954 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LBX1P52954 AL118558.3-201ENST00000607414 1079 ntBASIC19.23■□□□□ 0.67
LBX1P52954 AL365330.1-201ENST00000607459 531 ntBASIC19.23■□□□□ 0.67
LBX1P52954 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.23■□□□□ 0.67
LBX1P52954 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.23■□□□□ 0.67
LBX1P52954 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.23■□□□□ 0.67
LBX1P52954 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LBX1P52954 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LBX1P52954 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LBX1P52954 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LBX1P52954 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.22■□□□□ 0.67
LBX1P52954 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.22■□□□□ 0.67
LBX1P52954 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
LBX1P52954 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 HINT2P1-201ENST00000419438 481 ntBASIC19.22■□□□□ 0.67
LBX1P52954 KRT18P34-201ENST00000488218 1270 ntBASIC19.22■□□□□ 0.67
LBX1P52954 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.22■□□□□ 0.67
LBX1P52954 AC093726.1-201ENST00000608064 963 ntBASIC19.22■□□□□ 0.67
LBX1P52954 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.22■□□□□ 0.67
LBX1P52954 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.22■□□□□ 0.67
LBX1P52954 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LBX1P52954 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LBX1P52954 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms