Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.25■□□□□ 0.03
CCR9P51686 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.25■□□□□ 0.03
CCR9P51686 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CCR9P51686 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
CCR9P51686 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.25■□□□□ 0.03
CCR9P51686 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCR9P51686 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCR9P51686 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 HBZP1-201ENST00000354915 429 ntBASIC15.24■□□□□ 0.03
CCR9P51686 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCR9P51686 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 AC087499.1-201ENST00000418141 1075 ntBASIC15.24■□□□□ 0.03
CCR9P51686 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.24■□□□□ 0.03
CCR9P51686 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.24■□□□□ 0.03
CCR9P51686 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.24■□□□□ 0.03
CCR9P51686 AL390719.2-201ENST00000606993 987 ntBASIC15.24■□□□□ 0.03
CCR9P51686 AC019129.2-201ENST00000609837 1235 ntBASIC15.24■□□□□ 0.03
CCR9P51686 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCR9P51686 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.24■□□□□ 0.03
CCR9P51686 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
CCR9P51686 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.24■□□□□ 0.03
CCR9P51686 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCR9P51686 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CCR9P51686 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCR9P51686 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCR9P51686 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 YBX1P2-201ENST00000489612 999 ntBASIC15.23■□□□□ 0.03
CCR9P51686 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.23■□□□□ 0.03
CCR9P51686 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.23■□□□□ 0.03
CCR9P51686 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 AC092053.1-201ENST00000605787 1936 ntBASIC15.23■□□□□ 0.03
CCR9P51686 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCR9P51686 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCR9P51686 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCR9P51686 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCR9P51686 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCR9P51686 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms