Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AL049757.1-201ENST00000616842 1596 ntBASIC18.68■□□□□ 0.58
PDE6CP51160 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDE6CP51160 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PDE6CP51160 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE6CP51160 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
PDE6CP51160 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6CP51160 AC132008.2-207ENST00000454517 770 ntBASIC18.68■□□□□ 0.58
PDE6CP51160 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
PDE6CP51160 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.68■□□□□ 0.58
PDE6CP51160 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.68■□□□□ 0.58
PDE6CP51160 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE6CP51160 SLC25A6P4-201ENST00000586535 553 ntBASIC18.68■□□□□ 0.58
PDE6CP51160 AC008608.2-201ENST00000606089 416 ntBASIC18.68■□□□□ 0.58
PDE6CP51160 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6CP51160 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PDE6CP51160 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6CP51160 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6CP51160 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6CP51160 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 TNRC18P3-201ENST00000441896 2691 ntBASIC18.67■□□□□ 0.58
PDE6CP51160 AC046185.3-201ENST00000623228 1824 ntBASIC18.67■□□□□ 0.58
PDE6CP51160 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 INTS4P1-201ENST00000438455 1935 ntBASIC18.67■□□□□ 0.58
PDE6CP51160 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6CP51160 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6CP51160 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 SCARNA2-201ENST00000458748 420 ntBASIC18.67■□□□□ 0.58
PDE6CP51160 AF186996.4-201ENST00000467186 377 ntBASIC18.67■□□□□ 0.58
PDE6CP51160 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6CP51160 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.67■□□□□ 0.58
PDE6CP51160 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6CP51160 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDE6CP51160 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PDE6CP51160 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6CP51160 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDE6CP51160 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE6CP51160 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDE6CP51160 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE6CP51160 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PDE6CP51160 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDE6CP51160 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.66■□□□□ 0.58
PDE6CP51160 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.66■□□□□ 0.58
PDE6CP51160 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDE6CP51160 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.66■□□□□ 0.58
PDE6CP51160 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.66■□□□□ 0.58
PDE6CP51160 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms