Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.45■□□□□ 0.7
TM4SF4P48230 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TM4SF4P48230 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
TM4SF4P48230 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.45■□□□□ 0.7
TM4SF4P48230 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.45■□□□□ 0.7
TM4SF4P48230 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.45■□□□□ 0.7
TM4SF4P48230 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.45■□□□□ 0.7
TM4SF4P48230 CHCHD2P3-201ENST00000603038 451 ntBASIC19.45■□□□□ 0.7
TM4SF4P48230 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TM4SF4P48230 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 BTBD7P1-201ENST00000447253 1453 ntBASIC19.45■□□□□ 0.7
TM4SF4P48230 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TM4SF4P48230 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 CETN4P-206ENST00000642099 2168 ntBASIC19.44■□□□□ 0.7
TM4SF4P48230 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TM4SF4P48230 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TM4SF4P48230 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.44■□□□□ 0.7
TM4SF4P48230 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF4P48230 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF4P48230 ZNF890P-202ENST00000530367 1156 ntBASIC19.44■□□□□ 0.7
TM4SF4P48230 AC135586.1-201ENST00000539323 574 ntBASIC19.44■□□□□ 0.7
TM4SF4P48230 AC091167.2-201ENST00000579581 588 ntBASIC19.44■□□□□ 0.7
TM4SF4P48230 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TM4SF4P48230 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TM4SF4P48230 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.44■□□□□ 0.7
TM4SF4P48230 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TM4SF4P48230 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF4P48230 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TM4SF4P48230 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.43■□□□□ 0.7
TM4SF4P48230 CROCCP3-202ENST00000420820 1947 ntBASIC19.43■□□□□ 0.7
TM4SF4P48230 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TM4SF4P48230 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.43■□□□□ 0.7
TM4SF4P48230 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.43■□□□□ 0.7
TM4SF4P48230 SLC25A6P5-201ENST00000435663 894 ntBASIC19.43■□□□□ 0.7
TM4SF4P48230 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.43■□□□□ 0.7
TM4SF4P48230 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.43■□□□□ 0.7
TM4SF4P48230 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.43■□□□□ 0.7
TM4SF4P48230 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.43■□□□□ 0.7
TM4SF4P48230 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.43■□□□□ 0.7
TM4SF4P48230 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.43■□□□□ 0.7
TM4SF4P48230 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF4P48230 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF4P48230 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.42■□□□□ 0.7
TM4SF4P48230 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TM4SF4P48230 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.42■□□□□ 0.7
TM4SF4P48230 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF4P48230 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF4P48230 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.42■□□□□ 0.7
TM4SF4P48230 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF4P48230 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF4P48230 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF4P48230 RN7SL828P-201ENST00000607615 303 ntBASIC19.42■□□□□ 0.7
TM4SF4P48230 AL589739.1-201ENST00000607720 493 ntBASIC19.42■□□□□ 0.7
TM4SF4P48230 AL033527.4-201ENST00000641026 673 ntBASIC19.42■□□□□ 0.7
TM4SF4P48230 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TM4SF4P48230 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF4P48230 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF4P48230 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TM4SF4P48230 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TM4SF4P48230 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TM4SF4P48230 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF4P48230 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms