Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.21■□□□□ 0.19
CASP3P42574 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.21■□□□□ 0.19
CASP3P42574 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CASP3P42574 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.21■□□□□ 0.19
CASP3P42574 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.21■□□□□ 0.19
CASP3P42574 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CASP3P42574 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.21■□□□□ 0.19
CASP3P42574 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.21■□□□□ 0.19
CASP3P42574 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CASP3P42574 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CASP3P42574 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.21■□□□□ 0.19
CASP3P42574 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASP3P42574 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.21■□□□□ 0.18
CASP3P42574 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASP3P42574 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CASP3P42574 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.21■□□□□ 0.18
CASP3P42574 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CASP3P42574 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CASP3P42574 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CASP3P42574 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CASP3P42574 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 BX276092.7-203ENST00000637198 1536 ntBASIC16.2■□□□□ 0.18
CASP3P42574 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.2■□□□□ 0.18
CASP3P42574 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.2■□□□□ 0.18
CASP3P42574 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.2■□□□□ 0.18
CASP3P42574 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.2■□□□□ 0.18
CASP3P42574 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CASP3P42574 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CASP3P42574 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CASP3P42574 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.2■□□□□ 0.18
CASP3P42574 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.2■□□□□ 0.18
CASP3P42574 REXO1L6P-202ENST00000619970 1078 ntBASIC16.2■□□□□ 0.18
CASP3P42574 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.2■□□□□ 0.18
CASP3P42574 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASP3P42574 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.19■□□□□ 0.18
CASP3P42574 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CASP3P42574 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
CASP3P42574 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 PCDHA1-201ENST00000378133 2726 ntBASIC16.19■□□□□ 0.18
CASP3P42574 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.19■□□□□ 0.18
CASP3P42574 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.19■□□□□ 0.18
CASP3P42574 AKR1C7P-201ENST00000305623 895 ntBASIC16.19■□□□□ 0.18
CASP3P42574 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.19■□□□□ 0.18
CASP3P42574 AC103564.2-201ENST00000432853 1299 ntBASIC16.19■□□□□ 0.18
CASP3P42574 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.19■□□□□ 0.18
CASP3P42574 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.19■□□□□ 0.18
CASP3P42574 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.19■□□□□ 0.18
CASP3P42574 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
CASP3P42574 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASP3P42574 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CASP3P42574 DOC2GP-204ENST00000639052 2548 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms