Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRNA3P32297 PCDHA14-201ENST00000506751 2298 ntBASIC18.24■□□□□ 0.51
CHRNA3P32297 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.23■□□□□ 0.51
CHRNA3P32297 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRNA3P32297 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHRNA3P32297 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA3P32297 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA3P32297 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRNA3P32297 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CHRNA3P32297 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHRNA3P32297 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRNA3P32297 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRNA3P32297 MINOS1P3-201ENST00000457048 203 ntBASIC18.23■□□□□ 0.51
CHRNA3P32297 UNC93B7-201ENST00000509439 705 ntBASIC18.23■□□□□ 0.51
CHRNA3P32297 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.23■□□□□ 0.51
CHRNA3P32297 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.23■□□□□ 0.51
CHRNA3P32297 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 LINC02012-201ENST00000608206 1725 ntBASIC18.23■□□□□ 0.51
CHRNA3P32297 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA3P32297 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CHRNA3P32297 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRNA3P32297 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRNA3P32297 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 AC046185.3-201ENST00000623228 1824 ntBASIC18.22■□□□□ 0.51
CHRNA3P32297 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA3P32297 MTCL1P1-201ENST00000446207 792 ntBASIC18.22■□□□□ 0.51
CHRNA3P32297 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRNA3P32297 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA3P32297 KRT18P31-201ENST00000506277 1292 ntBASIC18.22■□□□□ 0.51
CHRNA3P32297 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA3P32297 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHRNA3P32297 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHRNA3P32297 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRNA3P32297 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CHRNA3P32297 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRNA3P32297 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA3P32297 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHRNA3P32297 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.21■□□□□ 0.51
CHRNA3P32297 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHRNA3P32297 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CHRNA3P32297 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.21■□□□□ 0.51
CHRNA3P32297 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.21■□□□□ 0.51
CHRNA3P32297 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHRNA3P32297 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.21■□□□□ 0.51
CHRNA3P32297 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.21■□□□□ 0.51
CHRNA3P32297 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.21■□□□□ 0.51
CHRNA3P32297 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.21■□□□□ 0.51
CHRNA3P32297 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.21■□□□□ 0.51
CHRNA3P32297 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.21■□□□□ 0.51
CHRNA3P32297 RN7SL510P-201ENST00000581311 263 ntBASIC18.21■□□□□ 0.51
CHRNA3P32297 IFNL4P1-201ENST00000607083 540 ntBASIC18.21■□□□□ 0.51
CHRNA3P32297 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 PCDHB19P-201ENST00000570871 2371 ntBASIC18.21■□□□□ 0.51
CHRNA3P32297 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHRNA3P32297 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA3P32297 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.21■□□□□ 0.51
CHRNA3P32297 OR6D1P-203ENST00000641209 4860 ntBASIC18.21■□□□□ 0.5
CHRNA3P32297 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CHRNA3P32297 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHRNA3P32297 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHRNA3P32297 UBALD1-205ENST00000590891 2641 ntBASIC18.2■□□□□ 0.5
CHRNA3P32297 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHRNA3P32297 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms