Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTFP26441 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTFP26441 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTFP26441 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTFP26441 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTFP26441 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTFP26441 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 GPR89P-201ENST00000407924 1495 ntBASIC17.25■□□□□ 0.35
CNTFP26441 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTFP26441 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNTFP26441 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 AC009336.1-201ENST00000608941 1553 ntBASIC17.25■□□□□ 0.35
CNTFP26441 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTFP26441 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.25■□□□□ 0.35
CNTFP26441 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 KRT18P57-201ENST00000443599 1254 ntBASIC17.25■□□□□ 0.35
CNTFP26441 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTFP26441 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTFP26441 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.25■□□□□ 0.35
CNTFP26441 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTFP26441 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 AL135999.2-201ENST00000622438 1686 ntBASIC17.25■□□□□ 0.35
CNTFP26441 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CNTFP26441 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTFP26441 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNTFP26441 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTFP26441 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.24■□□□□ 0.35
CNTFP26441 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.24■□□□□ 0.35
CNTFP26441 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CNTFP26441 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CNTFP26441 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.24■□□□□ 0.35
CNTFP26441 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CNTFP26441 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 AC005521.1-201ENST00000393351 872 ntBASIC17.24■□□□□ 0.35
CNTFP26441 STK19B-204ENST00000512515 211 ntBASIC17.24■□□□□ 0.35
CNTFP26441 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 FRMD8P1-201ENST00000440433 1524 ntBASIC17.24■□□□□ 0.35
CNTFP26441 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.24■□□□□ 0.35
CNTFP26441 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.24■□□□□ 0.35
CNTFP26441 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CNTFP26441 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.24■□□□□ 0.35
CNTFP26441 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTFP26441 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CNTFP26441 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.24■□□□□ 0.35
CNTFP26441 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CNTFP26441 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CNTFP26441 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
CNTFP26441 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTFP26441 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CNTFP26441 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CNTFP26441 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CNTFP26441 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNTFP26441 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTFP26441 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTFP26441 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTFP26441 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.23■□□□□ 0.35
CNTFP26441 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNTFP26441 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CNTFP26441 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms