Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFX1P22670 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.82■□□□□ 0.6
RFX1P22670 AC091607.1-201ENST00000490318 1060 ntBASIC18.82■□□□□ 0.6
RFX1P22670 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.82■□□□□ 0.6
RFX1P22670 STK25P1-201ENST00000585406 838 ntBASIC18.82■□□□□ 0.6
RFX1P22670 AC011467.2-201ENST00000598425 242 ntBASIC18.82■□□□□ 0.6
RFX1P22670 AL139424.1-201ENST00000607572 797 ntBASIC18.82■□□□□ 0.6
RFX1P22670 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RFX1P22670 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.82■□□□□ 0.6
RFX1P22670 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFX1P22670 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.82■□□□□ 0.6
RFX1P22670 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFX1P22670 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX1P22670 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX1P22670 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
RFX1P22670 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX1P22670 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.81■□□□□ 0.6
RFX1P22670 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.81■□□□□ 0.6
RFX1P22670 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.81■□□□□ 0.6
RFX1P22670 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFX1P22670 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX1P22670 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX1P22670 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX1P22670 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RFX1P22670 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX1P22670 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.8■□□□□ 0.6
RFX1P22670 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFX1P22670 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX1P22670 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.8■□□□□ 0.6
RFX1P22670 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.8■□□□□ 0.6
RFX1P22670 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.8■□□□□ 0.6
RFX1P22670 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 SCARNA2-201ENST00000458748 420 ntBASIC18.8■□□□□ 0.6
RFX1P22670 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX1P22670 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 AC114341.1-201ENST00000618070 349 ntBASIC18.8■□□□□ 0.6
RFX1P22670 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX1P22670 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFX1P22670 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX1P22670 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX1P22670 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX1P22670 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFX1P22670 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX1P22670 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX1P22670 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX1P22670 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.79■□□□□ 0.6
RFX1P22670 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX1P22670 AC132008.2-207ENST00000454517 770 ntBASIC18.79■□□□□ 0.6
RFX1P22670 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX1P22670 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms