Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB4AP20338 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 PAUPAR-201ENST00000630360 2965 ntBASIC13.29□□□□□ -0.28
RAB4AP20338 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RAB4AP20338 AL671710.1-201ENST00000610245 2349 ntBASIC13.28□□□□□ -0.28
RAB4AP20338 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 AP000593.1-201ENST00000393668 712 ntBASIC13.28□□□□□ -0.28
RAB4AP20338 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 AC008687.6-201ENST00000596318 630 ntBASIC13.28□□□□□ -0.28
RAB4AP20338 AC092118.2-201ENST00000613495 667 ntBASIC13.28□□□□□ -0.28
RAB4AP20338 AL050303.2-201ENST00000619798 666 ntBASIC13.28□□□□□ -0.28
RAB4AP20338 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB4AP20338 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB4AP20338 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB4AP20338 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.27□□□□□ -0.28
RAB4AP20338 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RAB4AP20338 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.27□□□□□ -0.28
RAB4AP20338 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.27□□□□□ -0.28
RAB4AP20338 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
RAB4AP20338 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB4AP20338 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RAB4AP20338 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB4AP20338 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAB4AP20338 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB4AP20338 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 AC060766.5-201ENST00000590539 871 ntBASIC13.27□□□□□ -0.29
RAB4AP20338 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAB4AP20338 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RAB4AP20338 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB4AP20338 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms