Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.99■□□□□ 0.79
ERCC3P19447 AC004877.2-201ENST00000623941 599 ntBASIC19.99■□□□□ 0.79
ERCC3P19447 AC010507.1-201ENST00000633895 436 ntBASIC19.99■□□□□ 0.79
ERCC3P19447 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
ERCC3P19447 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.99■□□□□ 0.79
ERCC3P19447 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC3P19447 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
ERCC3P19447 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.99■□□□□ 0.79
ERCC3P19447 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC3P19447 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC3P19447 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ERCC3P19447 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ERCC3P19447 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC3P19447 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.99■□□□□ 0.79
ERCC3P19447 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC3P19447 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC3P19447 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC3P19447 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ERCC3P19447 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ERCC3P19447 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ERCC3P19447 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ERCC3P19447 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ERCC3P19447 AC138028.4-201ENST00000564984 1845 ntBASIC19.98■□□□□ 0.79
ERCC3P19447 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ERCC3P19447 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.98■□□□□ 0.79
ERCC3P19447 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ERCC3P19447 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.98■□□□□ 0.79
ERCC3P19447 AC096734.2-201ENST00000562054 433 ntBASIC19.98■□□□□ 0.79
ERCC3P19447 OR7E47P-204ENST00000575924 449 ntBASIC19.98■□□□□ 0.79
ERCC3P19447 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.98■□□□□ 0.79
ERCC3P19447 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.98■□□□□ 0.79
ERCC3P19447 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.98■□□□□ 0.79
ERCC3P19447 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ERCC3P19447 ELL2P1-201ENST00000413990 1906 ntBASIC19.98■□□□□ 0.79
ERCC3P19447 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 AC008764.6-201ENST00000595909 2069 ntBASIC19.98■□□□□ 0.79
ERCC3P19447 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC3P19447 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC3P19447 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC3P19447 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ERCC3P19447 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.97■□□□□ 0.79
ERCC3P19447 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.97■□□□□ 0.79
ERCC3P19447 AC002558.1-201ENST00000488906 803 ntBASIC19.97■□□□□ 0.79
ERCC3P19447 PDPK2P-202ENST00000562415 1191 ntBASIC19.97■□□□□ 0.79
ERCC3P19447 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC3P19447 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC3P19447 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC3P19447 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC3P19447 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC3P19447 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC3P19447 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.97■□□□□ 0.79
ERCC3P19447 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC3P19447 BCL2-203ENST00000589955 5011 ntBASIC19.96■□□□□ 0.79
ERCC3P19447 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC3P19447 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC3P19447 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC3P19447 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC3P19447 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 CNN2P11-201ENST00000429351 262 ntBASIC19.96■□□□□ 0.79
ERCC3P19447 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC3P19447 CEND1P1-201ENST00000451006 455 ntBASIC19.96■□□□□ 0.79
ERCC3P19447 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.96■□□□□ 0.79
ERCC3P19447 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC3P19447 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.96■□□□□ 0.79
ERCC3P19447 GGTLC5P-201ENST00000617623 998 ntBASIC19.96■□□□□ 0.79
ERCC3P19447 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC3P19447 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC3P19447 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC3P19447 BCAR1-209ENST00000546196 1340 ntBASIC19.96■□□□□ 0.79
ERCC3P19447 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms