Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.26■□□□□ 0.35
XRCC1P18887 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.26■□□□□ 0.35
XRCC1P18887 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
XRCC1P18887 AC103564.2-201ENST00000432853 1299 ntBASIC17.26■□□□□ 0.35
XRCC1P18887 FAM197Y8-203ENST00000450145 560 ntBASIC17.26■□□□□ 0.35
XRCC1P18887 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.26■□□□□ 0.35
XRCC1P18887 FGFR3P6-201ENST00000457012 610 ntBASIC17.26■□□□□ 0.35
XRCC1P18887 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.26■□□□□ 0.35
XRCC1P18887 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.26■□□□□ 0.35
XRCC1P18887 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.26■□□□□ 0.35
XRCC1P18887 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.26■□□□□ 0.35
XRCC1P18887 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.26■□□□□ 0.35
XRCC1P18887 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
XRCC1P18887 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
XRCC1P18887 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC1P18887 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC1P18887 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
XRCC1P18887 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
XRCC1P18887 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC1P18887 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 AC046158.3-201ENST00000624947 2558 ntBASIC17.25■□□□□ 0.35
XRCC1P18887 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
XRCC1P18887 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
XRCC1P18887 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.25■□□□□ 0.35
XRCC1P18887 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 SCARNA2-201ENST00000458748 420 ntBASIC17.25■□□□□ 0.35
XRCC1P18887 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.25■□□□□ 0.35
XRCC1P18887 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.25■□□□□ 0.35
XRCC1P18887 TP73-AS1-207ENST00000624167 988 ntBASIC17.25■□□□□ 0.35
XRCC1P18887 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC1P18887 AP000867.4-201ENST00000641616 219 ntBASIC17.25■□□□□ 0.35
XRCC1P18887 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
XRCC1P18887 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
XRCC1P18887 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC1P18887 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
XRCC1P18887 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.24■□□□□ 0.35
XRCC1P18887 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
XRCC1P18887 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
XRCC1P18887 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
XRCC1P18887 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 MRPL3P1-201ENST00000400109 1033 ntBASIC17.24■□□□□ 0.35
XRCC1P18887 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.24■□□□□ 0.35
XRCC1P18887 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
XRCC1P18887 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.24■□□□□ 0.35
XRCC1P18887 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.24■□□□□ 0.35
XRCC1P18887 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.24■□□□□ 0.35
XRCC1P18887 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.24■□□□□ 0.35
XRCC1P18887 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
XRCC1P18887 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
XRCC1P18887 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
XRCC1P18887 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.24■□□□□ 0.35
XRCC1P18887 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
XRCC1P18887 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC1P18887 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
XRCC1P18887 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC1P18887 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms