Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 BCRP1-201ENST00000444246 691 ntBASIC16.21■□□□□ 0.19
CCL4P13236 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.21■□□□□ 0.19
CCL4P13236 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCL4P13236 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.21■□□□□ 0.19
CCL4P13236 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL4P13236 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.21■□□□□ 0.19
CCL4P13236 FAM86C2P-203ENST00000528684 1004 ntBASIC16.21■□□□□ 0.19
CCL4P13236 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.21■□□□□ 0.19
CCL4P13236 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL4P13236 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.21■□□□□ 0.19
CCL4P13236 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.21■□□□□ 0.19
CCL4P13236 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.21■□□□□ 0.19
CCL4P13236 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.21■□□□□ 0.19
CCL4P13236 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.21■□□□□ 0.19
CCL4P13236 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL4P13236 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL4P13236 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CCL4P13236 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL4P13236 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL4P13236 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCL4P13236 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CCL4P13236 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CCL4P13236 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL4P13236 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL4P13236 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL4P13236 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCL4P13236 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 AL355312.1-201ENST00000407115 2176 ntBASIC16.2■□□□□ 0.18
CCL4P13236 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 AL592309.1-201ENST00000443127 649 ntBASIC16.2■□□□□ 0.18
CCL4P13236 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 AC079140.1-201ENST00000508039 487 ntBASIC16.2■□□□□ 0.18
CCL4P13236 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.2■□□□□ 0.18
CCL4P13236 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.2■□□□□ 0.18
CCL4P13236 MIR4515-201ENST00000584082 81 ntBASIC16.2■□□□□ 0.18
CCL4P13236 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 AC005498.2-205ENST00000593218 784 ntBASIC16.2■□□□□ 0.18
CCL4P13236 AC009093.7-201ENST00000623853 1223 ntBASIC16.2■□□□□ 0.18
CCL4P13236 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL4P13236 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL4P13236 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL4P13236 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL4P13236 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 HMGA1P7-201ENST00000406908 502 ntBASIC16.19■□□□□ 0.18
CCL4P13236 TFAMP1-201ENST00000412727 736 ntBASIC16.19■□□□□ 0.18
CCL4P13236 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 FAM86GP-201ENST00000448322 971 ntBASIC16.19■□□□□ 0.18
CCL4P13236 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CCL4P13236 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL4P13236 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.19■□□□□ 0.18
CCL4P13236 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms