Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RARAP10276 AC104819.1-201ENST00000504587 486 ntBASIC18.15■□□□□ 0.5
RARAP10276 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RARAP10276 AC093458.2-201ENST00000623150 629 ntBASIC18.15■□□□□ 0.5
RARAP10276 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RARAP10276 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RARAP10276 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RARAP10276 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.15■□□□□ 0.5
RARAP10276 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
RARAP10276 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RARAP10276 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.14■□□□□ 0.5
RARAP10276 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
RARAP10276 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RARAP10276 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
RARAP10276 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RARAP10276 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.14■□□□□ 0.49
RARAP10276 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
RARAP10276 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
RARAP10276 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
RARAP10276 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.14■□□□□ 0.49
RARAP10276 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.14■□□□□ 0.49
RARAP10276 AC012615.1-201ENST00000565797 1299 ntBASIC18.14■□□□□ 0.49
RARAP10276 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.14■□□□□ 0.49
RARAP10276 PCDHB19P-201ENST00000570871 2371 ntBASIC18.14■□□□□ 0.49
RARAP10276 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.14■□□□□ 0.49
RARAP10276 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.14■□□□□ 0.49
RARAP10276 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RARAP10276 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARAP10276 AL162727.3-201ENST00000635661 2787 ntBASIC18.13■□□□□ 0.49
RARAP10276 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.13■□□□□ 0.49
RARAP10276 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 AL391005.1-201ENST00000623953 2435 ntBASIC18.13■□□□□ 0.49
RARAP10276 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.13■□□□□ 0.49
RARAP10276 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.13■□□□□ 0.49
RARAP10276 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RARAP10276 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.13■□□□□ 0.49
RARAP10276 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.13■□□□□ 0.49
RARAP10276 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RARAP10276 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.13■□□□□ 0.49
RARAP10276 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.13■□□□□ 0.49
RARAP10276 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.13■□□□□ 0.49
RARAP10276 AC114341.1-201ENST00000618070 349 ntBASIC18.13■□□□□ 0.49
RARAP10276 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.13■□□□□ 0.49
RARAP10276 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.13■□□□□ 0.49
RARAP10276 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RARAP10276 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 PCDH8P1-201ENST00000428983 2773 ntBASIC18.13■□□□□ 0.49
RARAP10276 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RARAP10276 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms