Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CD4P01730 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.01■□□□□ 0.63
CD4P01730 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.01■□□□□ 0.63
CD4P01730 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CD4P01730 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CD4P01730 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.01■□□□□ 0.63
CD4P01730 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD4P01730 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 AC129492.6-201ENST00000611383 1305 ntBASIC19■□□□□ 0.63
CD4P01730 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19■□□□□ 0.63
CD4P01730 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CD4P01730 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19■□□□□ 0.63
CD4P01730 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19■□□□□ 0.63
CD4P01730 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19■□□□□ 0.63
CD4P01730 AC051619.7-201ENST00000568314 623 ntBASIC19■□□□□ 0.63
CD4P01730 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19■□□□□ 0.63
CD4P01730 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19■□□□□ 0.63
CD4P01730 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19■□□□□ 0.63
CD4P01730 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CD4P01730 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19■□□□□ 0.63
CD4P01730 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19■□□□□ 0.63
CD4P01730 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19■□□□□ 0.63
CD4P01730 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD4P01730 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19■□□□□ 0.63
CD4P01730 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19■□□□□ 0.63
CD4P01730 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CD4P01730 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CD4P01730 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 PMS2P4-201ENST00000412466 1052 ntBASIC18.99■□□□□ 0.63
CD4P01730 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.99■□□□□ 0.63
CD4P01730 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 AC087163.2-201ENST00000457299 853 ntBASIC18.99■□□□□ 0.63
CD4P01730 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 AC069335.1-201ENST00000489972 472 ntBASIC18.99■□□□□ 0.63
CD4P01730 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 AC093214.1-201ENST00000511688 1107 ntBASIC18.99■□□□□ 0.63
CD4P01730 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 AL512356.2-201ENST00000546955 174 ntBASIC18.99■□□□□ 0.63
CD4P01730 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.99■□□□□ 0.63
CD4P01730 AF228730.6-201ENST00000641497 218 ntBASIC18.99■□□□□ 0.63
CD4P01730 AC084121.3-201ENST00000641716 218 ntBASIC18.99■□□□□ 0.63
CD4P01730 AC105233.6-201ENST00000642093 218 ntBASIC18.99■□□□□ 0.63
CD4P01730 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
CD4P01730 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.99■□□□□ 0.63
CD4P01730 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD4P01730 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.99■□□□□ 0.63
CD4P01730 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CD4P01730 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.98■□□□□ 0.63
CD4P01730 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 AC055876.3-201ENST00000431496 288 ntBASIC18.98■□□□□ 0.63
CD4P01730 AC005237.2-201ENST00000434368 219 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms