Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ZBED1O96006 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 RPS2P1-201ENST00000434010 821 ntBASIC18.28■□□□□ 0.52
ZBED1O96006 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.28■□□□□ 0.52
ZBED1O96006 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.28■□□□□ 0.52
ZBED1O96006 OR7E14P-202ENST00000530490 1290 ntBASIC18.28■□□□□ 0.52
ZBED1O96006 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.28■□□□□ 0.52
ZBED1O96006 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.28■□□□□ 0.52
ZBED1O96006 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ZBED1O96006 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.28■□□□□ 0.52
ZBED1O96006 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.28■□□□□ 0.52
ZBED1O96006 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 AC106820.2-201ENST00000563775 3264 ntBASIC18.27■□□□□ 0.52
ZBED1O96006 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.27■□□□□ 0.52
ZBED1O96006 AL023806.1-201ENST00000603994 1649 ntBASIC18.27■□□□□ 0.52
ZBED1O96006 HLA-A-201ENST00000376802 1334 ntBASIC18.27■□□□□ 0.52
ZBED1O96006 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZBED1O96006 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZBED1O96006 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZBED1O96006 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.27■□□□□ 0.52
ZBED1O96006 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZBED1O96006 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZBED1O96006 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZBED1O96006 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.27■□□□□ 0.52
ZBED1O96006 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.27■□□□□ 0.52
ZBED1O96006 AL031284.1-201ENST00000419297 478 ntBASIC18.27■□□□□ 0.52
ZBED1O96006 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
ZBED1O96006 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.27■□□□□ 0.52
ZBED1O96006 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.27■□□□□ 0.52
ZBED1O96006 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.27■□□□□ 0.52
ZBED1O96006 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.27■□□□□ 0.52
ZBED1O96006 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ZBED1O96006 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.27■□□□□ 0.52
ZBED1O96006 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZBED1O96006 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZBED1O96006 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZBED1O96006 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ZBED1O96006 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.27■□□□□ 0.51
ZBED1O96006 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ZBED1O96006 AC108860.2-201ENST00000562760 2183 ntBASIC18.27■□□□□ 0.51
ZBED1O96006 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
ZBED1O96006 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.27■□□□□ 0.51
ZBED1O96006 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
ZBED1O96006 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.26■□□□□ 0.51
ZBED1O96006 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 RPS2P28-201ENST00000314255 741 ntBASIC18.26■□□□□ 0.51
ZBED1O96006 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 RNA5SP419-201ENST00000515908 135 ntBASIC18.26■□□□□ 0.51
ZBED1O96006 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.26■□□□□ 0.51
ZBED1O96006 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 AP001005.1-201ENST00000571755 1248 ntBASIC18.26■□□□□ 0.51
ZBED1O96006 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.26■□□□□ 0.51
ZBED1O96006 AL589182.2-201ENST00000619332 1049 ntBASIC18.26■□□□□ 0.51
ZBED1O96006 AC107918.4-202ENST00000641623 219 ntBASIC18.26■□□□□ 0.51
ZBED1O96006 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.26■□□□□ 0.51
ZBED1O96006 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ZBED1O96006 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.26■□□□□ 0.51
ZBED1O96006 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZBED1O96006 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.26■□□□□ 0.51
ZBED1O96006 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZBED1O96006 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.25■□□□□ 0.51
ZBED1O96006 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZBED1O96006 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ZBED1O96006 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.25■□□□□ 0.51
ZBED1O96006 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZBED1O96006 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ZBED1O96006 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZBED1O96006 AC097637.2-201ENST00000624096 1997 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms