Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 AL590627.1-203ENST00000421194 1026 ntBASIC16.56■□□□□ 0.24
PRICKLE3O43900 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 PAWRP1-201ENST00000451083 565 ntBASIC16.56■□□□□ 0.24
PRICKLE3O43900 IGHV3-65-201ENST00000523210 341 ntBASIC16.56■□□□□ 0.24
PRICKLE3O43900 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 AC145285.3-201ENST00000564603 959 ntBASIC16.56■□□□□ 0.24
PRICKLE3O43900 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.56■□□□□ 0.24
PRICKLE3O43900 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRICKLE3O43900 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRICKLE3O43900 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 RNA5SP415-201ENST00000517246 115 ntBASIC16.55■□□□□ 0.24
PRICKLE3O43900 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 UNC93B6-202ENST00000528242 690 ntBASIC16.55■□□□□ 0.24
PRICKLE3O43900 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 AC005593.1-201ENST00000624894 515 ntBASIC16.55■□□□□ 0.24
PRICKLE3O43900 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 LINC02012-201ENST00000608206 1725 ntBASIC16.55■□□□□ 0.24
PRICKLE3O43900 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.55■□□□□ 0.24
PRICKLE3O43900 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE3O43900 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.55■□□□□ 0.24
PRICKLE3O43900 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 HTR7P1-202ENST00000624664 4411 ntBASIC16.54■□□□□ 0.24
PRICKLE3O43900 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 AC009947.1-201ENST00000444350 727 ntBASIC16.54■□□□□ 0.24
PRICKLE3O43900 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 AF228730.7-201ENST00000641842 219 ntBASIC16.54■□□□□ 0.24
PRICKLE3O43900 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms