Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.39■□□□□ 0.69
ACTN4O43707 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ACTN4O43707 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ACTN4O43707 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ACTN4O43707 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.38■□□□□ 0.69
ACTN4O43707 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ACTN4O43707 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.38■□□□□ 0.69
ACTN4O43707 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.38■□□□□ 0.69
ACTN4O43707 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.38■□□□□ 0.69
ACTN4O43707 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
ACTN4O43707 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.38■□□□□ 0.69
ACTN4O43707 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.38■□□□□ 0.69
ACTN4O43707 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.38■□□□□ 0.69
ACTN4O43707 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.38■□□□□ 0.69
ACTN4O43707 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
ACTN4O43707 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTN4O43707 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ACTN4O43707 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.37■□□□□ 0.69
ACTN4O43707 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ACTN4O43707 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ACTN4O43707 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
ACTN4O43707 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.37■□□□□ 0.69
ACTN4O43707 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.37■□□□□ 0.69
ACTN4O43707 NUS1P1-201ENST00000446295 882 ntBASIC19.37■□□□□ 0.69
ACTN4O43707 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.37■□□□□ 0.69
ACTN4O43707 KRT18P35-201ENST00000510488 1269 ntBASIC19.37■□□□□ 0.69
ACTN4O43707 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.37■□□□□ 0.69
ACTN4O43707 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.37■□□□□ 0.69
ACTN4O43707 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.37■□□□□ 0.69
ACTN4O43707 AC092329.2-201ENST00000598402 547 ntBASIC19.37■□□□□ 0.69
ACTN4O43707 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ACTN4O43707 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ACTN4O43707 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.37■□□□□ 0.69
ACTN4O43707 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ACTN4O43707 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ACTN4O43707 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ACTN4O43707 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTN4O43707 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.36■□□□□ 0.69
ACTN4O43707 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.36■□□□□ 0.69
ACTN4O43707 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
ACTN4O43707 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 PCDHA14-201ENST00000506751 2298 ntBASIC19.36■□□□□ 0.69
ACTN4O43707 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.36■□□□□ 0.69
ACTN4O43707 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ACTN4O43707 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.36■□□□□ 0.69
ACTN4O43707 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ACTN4O43707 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.36■□□□□ 0.69
ACTN4O43707 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.36■□□□□ 0.69
ACTN4O43707 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ACTN4O43707 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ACTN4O43707 AP000867.3-201ENST00000524675 377 ntBASIC19.36■□□□□ 0.69
ACTN4O43707 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.36■□□□□ 0.69
ACTN4O43707 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.36■□□□□ 0.69
ACTN4O43707 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms