Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CAPN9O14815 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN9O14815 AC079776.2-201ENST00000641154 1609 ntBASIC18.27■□□□□ 0.52
CAPN9O14815 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN9O14815 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN9O14815 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CAPN9O14815 AC009336.1-201ENST00000608941 1553 ntBASIC18.27■□□□□ 0.52
CAPN9O14815 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN9O14815 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.27■□□□□ 0.52
CAPN9O14815 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.27■□□□□ 0.52
CAPN9O14815 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN9O14815 SPDYE21P-201ENST00000413323 827 ntBASIC18.27■□□□□ 0.52
CAPN9O14815 SIGLEC30P-201ENST00000455569 941 ntBASIC18.27■□□□□ 0.52
CAPN9O14815 FGFR3P6-201ENST00000457012 610 ntBASIC18.27■□□□□ 0.52
CAPN9O14815 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.27■□□□□ 0.52
CAPN9O14815 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.27■□□□□ 0.52
CAPN9O14815 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN9O14815 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN9O14815 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN9O14815 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN9O14815 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPN9O14815 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPN9O14815 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPN9O14815 AL139288.1-201ENST00000623748 933 ntBASIC18.27■□□□□ 0.52
CAPN9O14815 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN9O14815 AC046185.3-201ENST00000623228 1824 ntBASIC18.27■□□□□ 0.52
CAPN9O14815 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN9O14815 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN9O14815 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN9O14815 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN9O14815 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN9O14815 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN9O14815 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CAPN9O14815 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN9O14815 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.27■□□□□ 0.51
CAPN9O14815 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN9O14815 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN9O14815 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.26■□□□□ 0.51
CAPN9O14815 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CAPN9O14815 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.26■□□□□ 0.51
CAPN9O14815 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN9O14815 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN9O14815 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.26■□□□□ 0.51
CAPN9O14815 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 AL121912.1-201ENST00000603683 238 ntBASIC18.26■□□□□ 0.51
CAPN9O14815 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN9O14815 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN9O14815 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CAPN9O14815 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN9O14815 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CAPN9O14815 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 AL138688.1-201ENST00000624851 1594 ntBASIC18.25■□□□□ 0.51
CAPN9O14815 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CAPN9O14815 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN9O14815 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN9O14815 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN9O14815 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CAPN9O14815 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CAPN9O14815 BX005266.1-201ENST00000473402 457 ntBASIC18.25■□□□□ 0.51
CAPN9O14815 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 NKAPP1-205ENST00000585790 367 ntBASIC18.25■□□□□ 0.51
CAPN9O14815 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN9O14815 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN9O14815 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN9O14815 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN9O14815 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN9O14815 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms