Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.76■□□□□ 0.27
UBFD1O14562 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 AC079328.2-201ENST00000561241 3354 ntBASIC16.76■□□□□ 0.27
UBFD1O14562 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.76■□□□□ 0.27
UBFD1O14562 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBFD1O14562 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UBFD1O14562 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.76■□□□□ 0.27
UBFD1O14562 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.76■□□□□ 0.27
UBFD1O14562 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 TMPOP1-202ENST00000424642 1267 ntBASIC16.76■□□□□ 0.27
UBFD1O14562 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.76■□□□□ 0.27
UBFD1O14562 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.76■□□□□ 0.27
UBFD1O14562 DOC2GP-204ENST00000639052 2548 ntBASIC16.76■□□□□ 0.27
UBFD1O14562 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.76■□□□□ 0.27
UBFD1O14562 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBFD1O14562 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 PCDHB17P-201ENST00000539533 2393 ntBASIC16.75■□□□□ 0.27
UBFD1O14562 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
UBFD1O14562 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.75■□□□□ 0.27
UBFD1O14562 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 NTF6B-201ENST00000591913 560 ntBASIC16.75■□□□□ 0.27
UBFD1O14562 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
UBFD1O14562 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBFD1O14562 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBFD1O14562 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.74■□□□□ 0.27
UBFD1O14562 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.74■□□□□ 0.27
UBFD1O14562 AC005332.1-201ENST00000577698 1310 ntBASIC16.74■□□□□ 0.27
UBFD1O14562 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
UBFD1O14562 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 CHCHD2P8-201ENST00000429873 447 ntBASIC16.74■□□□□ 0.27
UBFD1O14562 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.74■□□□□ 0.27
UBFD1O14562 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
UBFD1O14562 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms