Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SOX1O00570 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX1O00570 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
SOX1O00570 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.18■□□□□ 0.5
SOX1O00570 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.18■□□□□ 0.5
SOX1O00570 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.18■□□□□ 0.5
SOX1O00570 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SOX1O00570 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX1O00570 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX1O00570 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.18■□□□□ 0.5
SOX1O00570 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX1O00570 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 BRWD1P1-201ENST00000401091 371 ntBASIC18.18■□□□□ 0.5
SOX1O00570 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.18■□□□□ 0.5
SOX1O00570 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.18■□□□□ 0.5
SOX1O00570 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.18■□□□□ 0.5
SOX1O00570 DUTP2-201ENST00000519164 463 ntBASIC18.18■□□□□ 0.5
SOX1O00570 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.18■□□□□ 0.5
SOX1O00570 CTBP2P3-201ENST00000585629 1255 ntBASIC18.18■□□□□ 0.5
SOX1O00570 AC093010.1-201ENST00000473625 1624 ntBASIC18.18■□□□□ 0.5
SOX1O00570 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.18■□□□□ 0.5
SOX1O00570 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.18■□□□□ 0.5
SOX1O00570 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SOX1O00570 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX1O00570 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SOX1O00570 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.17■□□□□ 0.5
SOX1O00570 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SOX1O00570 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.17■□□□□ 0.5
SOX1O00570 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.17■□□□□ 0.5
SOX1O00570 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.17■□□□□ 0.5
SOX1O00570 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.17■□□□□ 0.5
SOX1O00570 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.17■□□□□ 0.5
SOX1O00570 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.17■□□□□ 0.5
SOX1O00570 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX1O00570 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.17■□□□□ 0.5
SOX1O00570 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SOX1O00570 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 PCDHAC2-203ENST00000615316 3011 ntBASIC18.17■□□□□ 0.5
SOX1O00570 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 AC006538.1-201ENST00000567905 1585 ntBASIC18.17■□□□□ 0.5
SOX1O00570 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 SLC7A15P-201ENST00000424028 1363 ntBASIC18.17■□□□□ 0.5
SOX1O00570 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX1O00570 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 AL032819.2-201ENST00000624543 2162 ntBASIC18.16■□□□□ 0.5
SOX1O00570 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.16■□□□□ 0.5
SOX1O00570 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.16■□□□□ 0.5
SOX1O00570 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.16■□□□□ 0.5
SOX1O00570 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.16■□□□□ 0.5
SOX1O00570 AC142381.1-201ENST00000426099 345 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms