Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHL1O00533 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHL1O00533 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHL1O00533 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC22.06■■□□□ 1.12
CHL1O00533 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHL1O00533 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CHL1O00533 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.06■■□□□ 1.12
CHL1O00533 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.06■■□□□ 1.12
CHL1O00533 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.06■■□□□ 1.12
CHL1O00533 AL023806.1-201ENST00000603994 1649 ntBASIC22.06■■□□□ 1.12
CHL1O00533 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.06■■□□□ 1.12
CHL1O00533 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
CHL1O00533 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.05■■□□□ 1.12
CHL1O00533 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.05■■□□□ 1.12
CHL1O00533 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.05■■□□□ 1.12
CHL1O00533 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 AC124947.2-201ENST00000547118 1133 ntBASIC22.05■■□□□ 1.12
CHL1O00533 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.05■■□□□ 1.12
CHL1O00533 MTDHP5-201ENST00000598980 586 ntBASIC22.05■■□□□ 1.12
CHL1O00533 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.05■■□□□ 1.12
CHL1O00533 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.05■■□□□ 1.12
CHL1O00533 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CHL1O00533 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHL1O00533 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CHL1O00533 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.04■■□□□ 1.12
CHL1O00533 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.04■■□□□ 1.12
CHL1O00533 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC22.04■■□□□ 1.12
CHL1O00533 AC108860.2-201ENST00000562760 2183 ntBASIC22.04■■□□□ 1.12
CHL1O00533 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.04■■□□□ 1.12
CHL1O00533 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.04■■□□□ 1.12
CHL1O00533 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.04■■□□□ 1.12
CHL1O00533 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.04■■□□□ 1.12
CHL1O00533 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC22.04■■□□□ 1.12
CHL1O00533 AC139530.3-201ENST00000620344 690 ntBASIC22.04■■□□□ 1.12
CHL1O00533 AC055717.3-201ENST00000622967 595 ntBASIC22.04■■□□□ 1.12
CHL1O00533 AC007064.4-201ENST00000637740 555 ntBASIC22.04■■□□□ 1.12
CHL1O00533 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CHL1O00533 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CHL1O00533 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHL1O00533 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CHL1O00533 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
CHL1O00533 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CHL1O00533 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.03■■□□□ 1.12
CHL1O00533 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CHL1O00533 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.03■■□□□ 1.12
CHL1O00533 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.03■■□□□ 1.12
CHL1O00533 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.03■■□□□ 1.12
CHL1O00533 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.03■■□□□ 1.12
CHL1O00533 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHL1O00533 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CHL1O00533 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms