Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 FAM220CP-201ENST00000395253 831 ntBASIC16.31■□□□□ 0.2
CLIC1O00299 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIC1O00299 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.31■□□□□ 0.2
CLIC1O00299 AC104076.2-201ENST00000448912 469 ntBASIC16.31■□□□□ 0.2
CLIC1O00299 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIC1O00299 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CLIC1O00299 AC063952.2-201ENST00000498792 1227 ntBASIC16.31■□□□□ 0.2
CLIC1O00299 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.31■□□□□ 0.2
CLIC1O00299 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIC1O00299 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.31■□□□□ 0.2
CLIC1O00299 AC011840.4-201ENST00000578471 627 ntBASIC16.31■□□□□ 0.2
CLIC1O00299 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIC1O00299 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.31■□□□□ 0.2
CLIC1O00299 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.31■□□□□ 0.2
CLIC1O00299 STK25P1-201ENST00000585406 838 ntBASIC16.31■□□□□ 0.2
CLIC1O00299 AC005336.2-201ENST00000593183 939 ntBASIC16.31■□□□□ 0.2
CLIC1O00299 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLIC1O00299 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIC1O00299 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC1O00299 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CLIC1O00299 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC1O00299 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 AL603756.1-201ENST00000606511 2163 ntBASIC16.3■□□□□ 0.2
CLIC1O00299 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
CLIC1O00299 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLIC1O00299 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.3■□□□□ 0.2
CLIC1O00299 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.3■□□□□ 0.2
CLIC1O00299 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC1O00299 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.3■□□□□ 0.2
CLIC1O00299 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 IGHV3-41-201ENST00000613121 348 ntBASIC16.3■□□□□ 0.2
CLIC1O00299 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.3■□□□□ 0.2
CLIC1O00299 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC1O00299 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLIC1O00299 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC1O00299 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC1O00299 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC1O00299 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.29■□□□□ 0.2
CLIC1O00299 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.29■□□□□ 0.2
CLIC1O00299 AL671277.2-201ENST00000458060 996 ntBASIC16.29■□□□□ 0.2
CLIC1O00299 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.29■□□□□ 0.2
CLIC1O00299 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 AC090616.6-201ENST00000582640 721 ntBASIC16.29■□□□□ 0.2
CLIC1O00299 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms