Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 AC027307.3-201ENST00000594262 1100 ntBASIC23.18■■□□□ 1.3
SBNO1A3KN83 LINC01451-201ENST00000623792 534 ntBASIC23.18■■□□□ 1.3
SBNO1A3KN83 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 TDG-209ENST00000544861 1387 ntTSL 2 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 AC009118.2-201ENST00000613275 655 ntBASIC23.17■■□□□ 1.3
SBNO1A3KN83 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SBNO1A3KN83 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC23.17■■□□□ 1.3
SBNO1A3KN83 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SBNO1A3KN83 PIN1P1-201ENST00000412108 996 ntBASIC23.16■■□□□ 1.3
SBNO1A3KN83 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 MIR3909-201ENST00000579518 119 ntBASIC23.16■■□□□ 1.3
SBNO1A3KN83 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SBNO1A3KN83 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SBNO1A3KN83 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SBNO1A3KN83 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SBNO1A3KN83 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SBNO1A3KN83 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SBNO1A3KN83 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC23.16■■□□□ 1.3
SBNO1A3KN83 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 AC120498.9-201ENST00000339021 3867 ntBASIC23.15■■□□□ 1.3
SBNO1A3KN83 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SBNO1A3KN83 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SBNO1A3KN83 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SBNO1A3KN83 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SBNO1A3KN83 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SBNO1A3KN83 NAA50-208ENST00000497255 789 ntTSL 5 BASIC23.14■■□□□ 1.3
SBNO1A3KN83 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
SBNO1A3KN83 NOP2-220ENST00000545915 630 ntTSL 2 BASIC23.14■■□□□ 1.3
SBNO1A3KN83 AL008721.1-201ENST00000609964 604 ntBASIC23.14■■□□□ 1.3
SBNO1A3KN83 SRP9-204ENST00000619790 377 ntTSL 2 BASIC23.14■■□□□ 1.3
SBNO1A3KN83 PODN-203ENST00000395871 2744 ntTSL 5 BASIC23.14■■□□□ 1.3
SBNO1A3KN83 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SBNO1A3KN83 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SBNO1A3KN83 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
SBNO1A3KN83 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SBNO1A3KN83 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SBNO1A3KN83 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SBNO1A3KN83 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SBNO1A3KN83 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms