Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC009949.1-201ENST00000623048 1830 ntBASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC106795.1-205ENST00000512851 1056 ntBASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NKILA-202ENST00000614771 2598 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC125634.1-201ENST00000438758 1403 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AL022342.1-201ENST00000400363 863 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SCARNA2-201ENST00000458748 420 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC093909.1-201ENST00000504731 1122 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AP001005.1-201ENST00000571755 1248 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MTDHP3-201ENST00000594186 672 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AL138831.2-201ENST00000606564 490 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AL773604.1-201ENST00000617417 272 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NFIC-211ENST00000641145 8399 ntBASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms