Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 RPS2P28-201ENST00000314255 741 ntBASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 AF228730.7-201ENST00000641842 219 ntBASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV5-4A0A0C4DH59 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV5-4A0A0C4DH59 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC012313.1-201ENST00000593393 3059 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC022211.2-201ENST00000585075 2527 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 RPS15P9-201ENST00000494093 319 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AL662844.1-201ENST00000546340 181 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AL049840.3-201ENST00000602669 611 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AL356488.2-201ENST00000602755 427 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC092068.3-201ENST00000587894 2016 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 BCL2-203ENST00000589955 5011 ntBASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRBV5-4A0A0C4DH59 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 AP002414.3-201ENST00000589352 1468 ntBASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 AL121894.2-201ENST00000602977 491 ntBASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-4A0A0C4DH59 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 LTB4R2-202ENST00000528054 3092 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms