Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 AC091799.1-201ENST00000422823 811 ntBASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 AL117332.1-201ENST00000622628 974 ntBASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 REXO1L1P-202ENST00000608646 1974 ntBASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 AL671710.1-201ENST00000610245 2349 ntBASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LINC01558Q9Y6Z2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms