Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 NSUN5P1-202ENST00000421140 1535 ntBASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 NSUN5P2-203ENST00000457352 1529 ntBASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 LINC01126-201ENST00000623515 1646 ntBASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 MRPL3P1-201ENST00000400109 1033 ntBASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX49Q9Y6V7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 AC105020.1-201ENST00000435356 2205 ntBASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 NUS1P2-201ENST00000417358 873 ntBASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 FAAHP1-202ENST00000446499 1238 ntBASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 PCDHA14-201ENST00000506751 2298 ntBASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX49Q9Y6V7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 CICP6-201ENST00000457191 2729 ntBASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 AGGF1P2-201ENST00000426656 2106 ntBASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms