Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AKR1C7P-201ENST00000305623 895 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AC005104.2-201ENST00000427818 678 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 SCARNA2-201ENST00000458748 420 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AF238378.1-201ENST00000526806 358 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AC019129.2-201ENST00000609837 1235 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AL355877.3-201ENST00000622820 899 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AC073592.5-201ENST00000624854 528 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AP000867.4-201ENST00000641616 219 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AL353593.2-201ENST00000602529 1483 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 AL355312.1-201ENST00000407115 2176 ntBASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA3PQ9Y6N3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
CLCA3PQ9Y6N3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CLCA3PQ9Y6N3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 AL121912.1-201ENST00000603683 238 ntBASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 CROCCP1-201ENST00000426910 5675 ntBASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCA3PQ9Y6N3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 KLF4P1-201ENST00000412782 1185 ntBASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCA3PQ9Y6N3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms