Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 UNC93B6-202ENST00000528242 690 ntBASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX9Q9Y5X1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 PTCHD3P3-201ENST00000403073 906 ntBASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 RPS15P9-201ENST00000494093 319 ntBASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 PP12613-201ENST00000424958 2230 ntBASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 AL590787.1-201ENST00000568856 1315 ntBASIC18.49■□□□□ 0.55
SNX9Q9Y5X1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 AC145285.3-201ENST00000564603 959 ntBASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 AC106730.1-201ENST00000566722 1090 ntBASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 Z83851.2-201ENST00000609564 659 ntBASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 CROCCP2-202ENST00000412962 2773 ntBASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 AC016396.2-201ENST00000562575 1417 ntBASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX9Q9Y5X1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 ZNF259P1-201ENST00000407656 1365 ntBASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX9Q9Y5X1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms