Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AL445228.2-201ENST00000605589 952 ntBASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AC046185.3-201ENST00000623228 1824 ntBASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 NSUN5P1-202ENST00000421140 1535 ntBASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 NSUN5P2-203ENST00000457352 1529 ntBASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 IGHV3-47-201ENST00000425060 335 ntBASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 STK25P1-201ENST00000585406 838 ntBASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 AC010331.1-201ENST00000611423 582 ntBASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 UBALD1-205ENST00000590891 2641 ntBASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA11Q9Y5H2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MIR1224-201ENST00000408193 85 ntBASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 POM121L3P-201ENST00000419331 1163 ntBASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ATP5G2P1-201ENST00000433580 426 ntBASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AC104819.1-201ENST00000504587 486 ntBASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AC012615.1-201ENST00000565797 1299 ntBASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MIR3180-1-201ENST00000580374 94 ntBASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MIR3180-3-201ENST00000584616 94 ntBASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 NPAP1P7-201ENST00000613027 823 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms