Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 IGHV3-22-201ENST00000520721 359 ntBASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 SART3-203ENST00000546611 1184 ntBASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB11Q9Y5F2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDHB11Q9Y5F2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDHB11Q9Y5F2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDHB11Q9Y5F2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB11Q9Y5F2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB11Q9Y5F2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 KRT18P3-201ENST00000451602 1288 ntBASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 AL356488.2-201ENST00000602755 427 ntBASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 AC140113.2-201ENST00000604370 208 ntBASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 AP000867.4-201ENST00000641616 219 ntBASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 AL023806.1-201ENST00000603994 1649 ntBASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB11Q9Y5F2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 AC098831.1-202ENST00000438821 336 ntBASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 DNAJB3-201ENST00000446806 729 ntBASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 Z83851.2-201ENST00000609564 659 ntBASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 AC073592.5-201ENST00000624854 528 ntBASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms