Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 CU639417.3-201ENST00000624240 1404 ntBASIC21.77■■□□□ 1.08
CCNL1Q9UK58 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNL1Q9UK58 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
CCNL1Q9UK58 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.76■■□□□ 1.07
CCNL1Q9UK58 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 SPDYE12P-201ENST00000618416 771 ntBASIC21.76■■□□□ 1.07
CCNL1Q9UK58 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNL1Q9UK58 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 RNU1-129P-201ENST00000384064 167 ntBASIC21.75■■□□□ 1.07
CCNL1Q9UK58 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 U91328.1-201ENST00000437528 223 ntBASIC21.75■■□□□ 1.07
CCNL1Q9UK58 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 U1.21-201ENST00000580816 167 ntBASIC21.75■■□□□ 1.07
CCNL1Q9UK58 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 AL031055.1-201ENST00000606362 631 ntBASIC21.75■■□□□ 1.07
CCNL1Q9UK58 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 AL353732.1-201ENST00000569618 1459 ntBASIC21.75■■□□□ 1.07
CCNL1Q9UK58 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNL1Q9UK58 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CCNL1Q9UK58 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.74■■□□□ 1.07
CCNL1Q9UK58 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms