Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 SLC25A24-204ENST00000569674 2357 ntBASIC18.09■□□□□ 0.49
CHD7Q9P2D1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 AC106886.1-201ENST00000568660 600 ntBASIC18.09■□□□□ 0.49
CHD7Q9P2D1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 TEX28P1-201ENST00000613479 1221 ntBASIC18.09■□□□□ 0.49
CHD7Q9P2D1 TEX28P2-201ENST00000617764 1221 ntBASIC18.09■□□□□ 0.49
CHD7Q9P2D1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD7Q9P2D1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.08■□□□□ 0.49
CHD7Q9P2D1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHD7Q9P2D1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.08■□□□□ 0.49
CHD7Q9P2D1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHD7Q9P2D1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.08■□□□□ 0.49
CHD7Q9P2D1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.49
CHD7Q9P2D1 AC140912.1-201ENST00000577171 1054 ntBASIC18.08■□□□□ 0.49
CHD7Q9P2D1 AC004790.1-201ENST00000612686 536 ntBASIC18.08■□□□□ 0.49
CHD7Q9P2D1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.08■□□□□ 0.49
CHD7Q9P2D1 FOXO1B-201ENST00000504678 1527 ntBASIC18.08■□□□□ 0.48
CHD7Q9P2D1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD7Q9P2D1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD7Q9P2D1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD7Q9P2D1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CHD7Q9P2D1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD7Q9P2D1 AL138918.1-201ENST00000568306 659 ntBASIC18.08■□□□□ 0.48
CHD7Q9P2D1 MIR4515-201ENST00000584082 81 ntBASIC18.08■□□□□ 0.48
CHD7Q9P2D1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD7Q9P2D1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 AC008267.7-201ENST00000624570 1194 ntBASIC18.07■□□□□ 0.48
CHD7Q9P2D1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 AC093503.3-201ENST00000624917 2352 ntBASIC18.07■□□□□ 0.48
CHD7Q9P2D1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD7Q9P2D1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 MIR658-201ENST00000385210 100 ntBASIC18.06■□□□□ 0.48
CHD7Q9P2D1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 AC012569.1-201ENST00000591191 1524 ntBASIC18.06■□□□□ 0.48
CHD7Q9P2D1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 KRT17P8-201ENST00000540749 863 ntBASIC18.06■□□□□ 0.48
CHD7Q9P2D1 AC104794.3-201ENST00000566840 1248 ntBASIC18.06■□□□□ 0.48
CHD7Q9P2D1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms