Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRFN1Q9P244 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
LRFN1Q9P244 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN1Q9P244 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN1Q9P244 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.89■□□□□ 0.13
LRFN1Q9P244 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN1Q9P244 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN1Q9P244 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 AC012317.2-201ENST00000623305 2251 ntBASIC15.88■□□□□ 0.13
LRFN1Q9P244 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 LTB4R2-202ENST00000528054 3092 ntBASIC15.88■□□□□ 0.13
LRFN1Q9P244 AP002414.1-201ENST00000391405 1147 ntBASIC15.88■□□□□ 0.13
LRFN1Q9P244 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 PRSS29P-201ENST00000440800 595 ntBASIC15.88■□□□□ 0.13
LRFN1Q9P244 VN2R19P-201ENST00000442399 1052 ntBASIC15.88■□□□□ 0.13
LRFN1Q9P244 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 AC002347.1-201ENST00000569543 541 ntBASIC15.88■□□□□ 0.13
LRFN1Q9P244 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 GGTLC5P-201ENST00000617623 998 ntBASIC15.88■□□□□ 0.13
LRFN1Q9P244 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.88■□□□□ 0.13
LRFN1Q9P244 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN1Q9P244 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 AL135999.2-201ENST00000622438 1686 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 YBX2P1-201ENST00000394192 760 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 MRPL20P1-201ENST00000400819 433 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 AC023274.1-201ENST00000418278 595 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 DNAJB3-201ENST00000446806 729 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 MIR3687-2-201ENST00000577708 61 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 MIR3687-1-201ENST00000614492 61 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 AC005332.8-201ENST00000622750 2735 ntBASIC15.87■□□□□ 0.13
LRFN1Q9P244 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.87■□□□□ 0.13
LRFN1Q9P244 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRFN1Q9P244 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 FER1L4-210ENST00000615531 5998 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms