Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 OR6D1P-203ENST00000641209 4860 ntBASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 KRT18P58-201ENST00000527480 1120 ntBASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 LINC01451-201ENST00000623792 534 ntBASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.53■□□□□ 0.4
NCKIPSDQ9NZQ3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 AC018712.1-201ENST00000455767 687 ntBASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 MTDHP3-201ENST00000594186 672 ntBASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 AF228730.7-201ENST00000641842 219 ntBASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKIPSDQ9NZQ3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.52■□□□□ 0.39
NCKIPSDQ9NZQ3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 AC011270.2-201ENST00000624293 2550 ntBASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 INTS4P1-201ENST00000438455 1935 ntBASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 AC125634.1-201ENST00000438758 1403 ntBASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 FGFR3P6-201ENST00000457012 610 ntBASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 AC139887.3-201ENST00000568585 713 ntBASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms